BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026F02SP1|AL428575
(894 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1027 1720 0.0
3x_Contig420 175 1e-43
3x_Contig1362 155 1e-37
3x_Contig1590 151 2e-36
3x_Contig356 149 7e-36
3x_Contig450 127 3e-29
>3x_Contig1027
Length = 4522
Score = 1720 bits (864), Expect = 0.0
Identities = 886/895 (98%), Gaps = 2/895 (0%)
Strand = Plus / Minus
Query: 1 gatcacggagactacactacataaactataaaacatatagctaactaaacactaattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2975 gatcacggagactacactacataaactataaaacatatagctaactaaacactaattaaa 2916
Query: 61 aatgtaatcatacctaacataataatagatatttgaaatttcaatccttttccatgtagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2915 aatgtaatcatacctaacataataatagatatttgaaatttcaatccttttccatgtagg 2856
Query: 121 gctgataatcttcgtaatgttcaaactaaaacgaatagaaatcatattagacagttggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2855 gctgataatcttcgtaatgttcaaactaaaacgaatagaaatcatattagacagttggtg 2796
Query: 181 gaacaggccatgccaatataataggtggttagcattggctttgcgtaaccgacacatgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2795 gaacaggccatgccaatataataggtggttagcattggctttgcgtaaccgacacatgac 2736
Query: 241 aaagcatataaaggaatactgagcctaatctactgtttgcttgtaatcagatcaagaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2735 aaagcatataaaggaatactgagcctaatctactgtttgcttgtaatcagatcaagaggt 2676
Query: 301 ccctggtgtattattactgccgaagatatacagccaacggagaccattacacgtgacttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2675 ccctggtgtattattactgccgaagatatacagccaacggagaccattacacgtgacttg 2616
Query: 361 tggtctctgatgccataataaaataggaagggcntaaatttctcctttttctttttatga 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2615 tggtctctgatgccataataaaataggaagggcataaatttctcctttttctttttatga 2556
Query: 421 caacaataagcttctatggccaagttggtaaggcgccacactagtaatgtggagatcatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2555 caacaataagcttctatggccaagttggtaaggcgccacactagtaatgtggagatcatc 2496
Query: 481 agttcgactctggttggaagcatttttwtgaatttwataaatgctcaaaagaaaaaaggc 540
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 2495 agttcgactctggttggaagcatttttttgaatttaataaatgctcaaaagaaaaaaggc 2436
Query: 541 tggcgtttgggcttaatctttacagcaaaagagtccatatccagttatcaaaactgttgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2435 tggcgtttgggcttaatctttacagcaaaagagtccatatccagttatcaaaactgttgt 2376
Query: 601 attacatgtgctacatgtgttactaattgtatacctgtataartwttttwaaaaatgtgt 660
|||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||
Sbjct: 2375 attacatgtgctacatgtgttactaattgtatacctgtataagtttttttaaaaatgtg- 2317
Query: 661 tacacgaacacatcttctgacgtgattatctattcgccacggtaaatgtggtaaggagat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2316 tacacgaacacatcttctgacgtgattatctattcgccacggtaaatgtggtaaggagat 2257
Query: 721 gcttggttggaagcaaataccaaaacatcagcgatgacagtattaggttttcttgaagtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2256 gcttggttggaagcaaataccaaaacatcagcgatgacagtattaggttttcttgaagtg 2197
Query: 781 gcataaacgatcaagtcagcaatgtcatctgcatatagaggagtagtacctttgt-aacc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2196 gcataaacgatcaagtcagcaatgtcatctgcatatagaggagtagtacctttgtaaacc 2137
Query: 840 tgtttagcacgatcggcatcacccttgtwtctaactagagagaactcagtttcga 894
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2136 tgtttagcacgatcggcatcacccttgtatctaactagagagaactcagtttcga 2082
>3x_Contig420
Length = 1461
Score = 175 bits (88), Expect = 1e-43
Identities = 98/102 (96%)
Strand = Plus / Minus
Query: 409 ttctttttatgacaacaataagcttctatggccaagttggtaaggcgccacactagtaat 468
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 ttctttttatgacaagaaacagcttctatggccaagttggtaaggcgccacactagtaat 816
Query: 469 gtggagatcatcagttcgactctggttggaagcatttttwtg 510
||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 815 gtggagatcatcagttcgactctggttggaagcatttttttg 774
>3x_Contig1362
Length = 8864
Score = 155 bits (78), Expect = 1e-37
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 429 agcttctatggccaagttggtaaggcgccacactagtaatgtggagatcatcagttcgac 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8292 agcttctatggccaagttggtaaggcgccacactagtaatgtggagatcatcagttcgac 8351
Query: 489 tctggttggaagcatttt 506
||||||||||||||||||
Sbjct: 8352 tctggttggaagcatttt 8369
>3x_Contig1590
Length = 13653
Score = 151 bits (76), Expect = 2e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 429 agcttctatggccaagttggtaaggcgccacactagtaatgtggagatcatcagttcgac 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9454 agcttctatggccaagttggtaaggcgccacactagtaatgtggagatcatcagttcgac 9513
Query: 489 tctggttggaagcatt 504
||||||||||||||||
Sbjct: 9514 tctggttggaagcatt 9529
>3x_Contig356
Length = 1664
Score = 149 bits (75), Expect = 7e-36
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 429 agcttctatggccaagttggtaaggcgccacactagtaatgtggagatcatcagttcgac 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agcttctatggccaagttggtaaggcgccacactagtaatgtggagatcatcagttcgac 325
Query: 489 tctggttggaagcat 503
|||||||||||||||
Sbjct: 324 tctggttggaagcat 310
>3x_Contig450
Length = 1374
Score = 127 bits (64), Expect = 3e-29
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 436 atggccaagttggtaaggcgccacactagtaatgtggagatcatcagttcgactctggtt 495
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggccaagttggtaaggcgccatactagtaatgtggagatcatcagttcgactctggtt 60
Query: 496 ggaagcattttt 507
||||||| ||||
Sbjct: 61 ggaagcaatttt 72
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5987
Number of Sequences: 1807
Number of extensions: 5987
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 6
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)